Enhancing Mass spectrometry-based tumor immunopeptide identification: machine learning filter leveraging HLA binding affinity, aliphatic index and retention time deviation

Feifei Wei, Taku Kouro, Yuko Nakamura, Hiroki Ueda, Susumu Iiizumi, Kyoko Hasegawa, Yuki Asahina, Takeshi Kishida, Soichiro Morinaga, Hidetomo Himuro, Shun Horaguchi, Kayoko Tsuji, Yasunobu Mano, Norihiro Nakamura, Takeshi Kawamura, Tetsuro Sasada

Open source

DOI
10.1016/j.csbj.2024.01.023
Published
2024-02-03
Container
Computational and Structural Biotechnology Journal
Publisher
American Association for the Advancement of Science (AAAS)
Open access
unknown

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BibTeX

@article{allodium:10.1016/j.csbj.2024.01.023,
  title = {Enhancing Mass spectrometry-based tumor immunopeptide identification: machine learning filter leveraging HLA binding affinity, aliphatic index and retention time deviation},
  author = {Feifei Wei and Taku Kouro and Yuko Nakamura and Hiroki Ueda and Susumu Iiizumi and Kyoko Hasegawa and Yuki Asahina and Takeshi Kishida and Soichiro Morinaga and Hidetomo Himuro and Shun Horaguchi and Kayoko Tsuji and Yasunobu Mano and Norihiro Nakamura and Takeshi Kawamura and Tetsuro Sasada},
  year = {2024},
  journal = {Computational and Structural Biotechnology Journal},
  doi = {10.1016/j.csbj.2024.01.023},
  url = {https://doi.org/10.1016/j.csbj.2024.01.023}
}

RIS

TY  - JOUR
TI  - Enhancing Mass spectrometry-based tumor immunopeptide identification: machine learning filter leveraging HLA binding affinity, aliphatic index and retention time deviation
AU  - Feifei Wei
AU  - Taku Kouro
AU  - Yuko Nakamura
AU  - Hiroki Ueda
AU  - Susumu Iiizumi
AU  - Kyoko Hasegawa
AU  - Yuki Asahina
AU  - Takeshi Kishida
AU  - Soichiro Morinaga
AU  - Hidetomo Himuro
AU  - Shun Horaguchi
AU  - Kayoko Tsuji
AU  - Yasunobu Mano
AU  - Norihiro Nakamura
AU  - Takeshi Kawamura
AU  - Tetsuro Sasada
PY  - 2024
JO  - Computational and Structural Biotechnology Journal
DO  - 10.1016/j.csbj.2024.01.023
UR  - https://doi.org/10.1016/j.csbj.2024.01.023
ER  - 

APA

Wei, F., Kouro, T., Nakamura, Y., Ueda, H., Iiizumi, S., Hasegawa, K., Asahina, Y., Kishida, T., Morinaga, S., Himuro, H., Horaguchi, S., Tsuji, K., Mano, Y., Nakamura, N., Kawamura, T., & Sasada, T. (2024). Enhancing Mass spectrometry-based tumor immunopeptide identification: machine learning filter leveraging HLA binding affinity, aliphatic index and retention time deviation. Computational and Structural Biotechnology Journal. https://doi.org/10.1016/j.csbj.2024.01.023

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