Kaminari: a frugal colored index for approximate <i>k</i> -mer queries

Victor Levallois, Yoshihiro Shibuya, Bertrand Le Gal, Yoann Dufresne, Rob Patro, Pierre Peterlongo, Giulio Ermanno Pibiri

Open source

DOI: 10.1093/bioadv/vbag120
Published: 2026
Container: Bioinformatics Advances
Publisher: Oxford University Press (OUP)
Open access: unknown

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Cite this work

BibTeX

@article{allodium:10.1093/bioadv/vbag120,
  title = {Kaminari: a frugal colored index for approximate
                    <i>k</i>
                    -mer queries},
  author = {Victor Levallois and Yoshihiro Shibuya and Bertrand Le Gal and Yoann Dufresne and Rob Patro and Pierre Peterlongo and Giulio Ermanno Pibiri},
  year = {2026},
  journal = {Bioinformatics Advances},
  doi = {10.1093/bioadv/vbag120},
  url = {https://doi.org/10.1093/bioadv/vbag120}
}

RIS

TY  - JOUR
TI  - Kaminari: a frugal colored index for approximate
                    <i>k</i>
                    -mer queries
AU  - Victor Levallois
AU  - Yoshihiro Shibuya
AU  - Bertrand Le Gal
AU  - Yoann Dufresne
AU  - Rob Patro
AU  - Pierre Peterlongo
AU  - Giulio Ermanno Pibiri
PY  - 2026
JO  - Bioinformatics Advances
DO  - 10.1093/bioadv/vbag120
UR  - https://doi.org/10.1093/bioadv/vbag120
ER  -

APA

Levallois, V., Shibuya, Y., Gal, B. L., Dufresne, Y., Patro, R., Peterlongo, P., & Pibiri, G. E. (2026). Kaminari: a frugal colored index for approximate <i>k</i> -mer queries. Bioinformatics Advances. https://doi.org/10.1093/bioadv/vbag120

Source records

crossref · retrieved 2026-09-25T19:03:07.501Z