Duplex-Indel: a Snakemake pipeline for somatic Indel calling in Tn5 transposase-based duplex sequencing data.

Dong G, Hilal N, Mallett S, Jin B, Mao S, Manam MD, Shao DD, Choudhury S, Huang AY, Lee EA

Open source

DOI
10.1093/bioinformatics/btag205
Published
2026 May 3
Container
Bioinformatics (Oxford, England)
Publisher
Not recorded
Open access
yes

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BibTeX

@article{allodium:10.1093/bioinformatics/btag205,
  title = {Duplex-Indel: a Snakemake pipeline for somatic Indel calling in Tn5 transposase-based duplex sequencing data.},
  author = {Dong G and Hilal N and Mallett S and Jin B and Mao S and Manam MD and Shao DD and Choudhury S and Huang AY and Lee EA},
  year = {2026},
  journal = {Bioinformatics (Oxford, England)},
  doi = {10.1093/bioinformatics/btag205},
  url = {https://doi.org/10.1093/bioinformatics/btag205}
}

RIS

TY  - JOUR
TI  - Duplex-Indel: a Snakemake pipeline for somatic Indel calling in Tn5 transposase-based duplex sequencing data.
AU  - Dong G
AU  - Hilal N
AU  - Mallett S
AU  - Jin B
AU  - Mao S
AU  - Manam MD
AU  - Shao DD
AU  - Choudhury S
AU  - Huang AY
AU  - Lee EA
PY  - 2026
JO  - Bioinformatics (Oxford, England)
DO  - 10.1093/bioinformatics/btag205
UR  - https://doi.org/10.1093/bioinformatics/btag205
ER  - 

APA

G, D., N, H., S, M., B, J., S, M., MD, M., DD, S., S, C., AY, H., & EA, L. (2026). Duplex-Indel: a Snakemake pipeline for somatic Indel calling in Tn5 transposase-based duplex sequencing data.. Bioinformatics (Oxford, England). https://doi.org/10.1093/bioinformatics/btag205

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