GENCODE 2025: reference gene annotation for human and mouse

Jonathan M Mudge, Sílvia Carbonell-Sala, Mark Diekhans, Jose Gonzalez Martinez, Toby Hunt, Irwin Jungreis, Jane E Loveland, Carme Arnan, If Barnes, Ruth Bennett, Andrew Berry, Alexandra Bignell, Daniel Cerdán-Vélez, Kelly Cochran, Lucas T Cortés, Claire Davidson, Sarah Donaldson, Cagatay Dursun, Reham Fatima, Matthew Hardy, Prajna Hebbar, Zoe Hollis, Benjamin T James, Yunzhe Jiang, Rory Johnson, Gazaldeep Kaur, Mike Kay, Riley J Mangan, Miguel Maquedano, Laura Martínez Gómez, Nourhen Mathlouthi, Ryan Merritt, Pengyu Ni, Emilio Palumbo, Tamara Perteghella, Fernando Pozo, Shriya Raj, Cristina Sisu, Emily Steed, Dulika Sumathipala, Marie-Marthe Suner, Barbara Uszczynska-Ratajczak, Elizabeth Wass, Yucheng T Yang, Dingyao Zhang, Robert D Finn, Mark Gerstein, Roderic Guigó, Tim J P Hubbard, Manolis Kellis, Anshul Kundaje, Benedict Paten, Michael L Tress, Ewan Birney, Fergal J Martin, Adam Frankish

Open source

DOI: 10.1093/nar/gkae1078
Published: 2024-11-20
Container: Nucleic Acids Research
Publisher: Oxford University Press (OUP)
Open access: unknown

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Cite this work

BibTeX

@article{allodium:10.1093/nar/gkae1078,
  title = {GENCODE 2025: reference gene annotation for human and mouse},
  author = {Jonathan M Mudge and Sílvia Carbonell-Sala and Mark Diekhans and Jose Gonzalez Martinez and Toby Hunt and Irwin Jungreis and Jane E Loveland and Carme Arnan and If Barnes and Ruth Bennett and Andrew Berry and Alexandra Bignell and Daniel Cerdán-Vélez and Kelly Cochran and Lucas T Cortés and Claire Davidson and Sarah Donaldson and Cagatay Dursun and Reham Fatima and Matthew Hardy and Prajna Hebbar and Zoe Hollis and Benjamin T James and Yunzhe Jiang and Rory Johnson and Gazaldeep Kaur and Mike Kay and Riley J Mangan and Miguel Maquedano and Laura Martínez Gómez and Nourhen Mathlouthi and Ryan Merritt and Pengyu Ni and Emilio Palumbo and Tamara Perteghella and Fernando Pozo and Shriya Raj and Cristina Sisu and Emily Steed and Dulika Sumathipala and Marie-Marthe Suner and Barbara Uszczynska-Ratajczak and Elizabeth Wass and Yucheng T Yang and Dingyao Zhang and Robert D Finn and Mark Gerstein and Roderic Guigó and Tim J P Hubbard and Manolis Kellis and Anshul Kundaje and Benedict Paten and Michael L Tress and Ewan Birney and Fergal J Martin and Adam Frankish},
  year = {2024},
  journal = {Nucleic Acids Research},
  doi = {10.1093/nar/gkae1078},
  url = {https://doi.org/10.1093/nar/gkae1078}
}

RIS

TY  - JOUR
TI  - GENCODE 2025: reference gene annotation for human and mouse
AU  - Jonathan M Mudge
AU  - Sílvia Carbonell-Sala
AU  - Mark Diekhans
AU  - Jose Gonzalez Martinez
AU  - Toby Hunt
AU  - Irwin Jungreis
AU  - Jane E Loveland
AU  - Carme Arnan
AU  - If Barnes
AU  - Ruth Bennett
AU  - Andrew Berry
AU  - Alexandra Bignell
AU  - Daniel Cerdán-Vélez
AU  - Kelly Cochran
AU  - Lucas T Cortés
AU  - Claire Davidson
AU  - Sarah Donaldson
AU  - Cagatay Dursun
AU  - Reham Fatima
AU  - Matthew Hardy
AU  - Prajna Hebbar
AU  - Zoe Hollis
AU  - Benjamin T James
AU  - Yunzhe Jiang
AU  - Rory Johnson
AU  - Gazaldeep Kaur
AU  - Mike Kay
AU  - Riley J Mangan
AU  - Miguel Maquedano
AU  - Laura Martínez Gómez
AU  - Nourhen Mathlouthi
AU  - Ryan Merritt
AU  - Pengyu Ni
AU  - Emilio Palumbo
AU  - Tamara Perteghella
AU  - Fernando Pozo
AU  - Shriya Raj
AU  - Cristina Sisu
AU  - Emily Steed
AU  - Dulika Sumathipala
AU  - Marie-Marthe Suner
AU  - Barbara Uszczynska-Ratajczak
AU  - Elizabeth Wass
AU  - Yucheng T Yang
AU  - Dingyao Zhang
AU  - Robert D Finn
AU  - Mark Gerstein
AU  - Roderic Guigó
AU  - Tim J P Hubbard
AU  - Manolis Kellis
AU  - Anshul Kundaje
AU  - Benedict Paten
AU  - Michael L Tress
AU  - Ewan Birney
AU  - Fergal J Martin
AU  - Adam Frankish
PY  - 2024
JO  - Nucleic Acids Research
DO  - 10.1093/nar/gkae1078
UR  - https://doi.org/10.1093/nar/gkae1078
ER  -

APA

Mudge, J. M., Carbonell-Sala, S., Diekhans, M., Martinez, J. G., Hunt, T., Jungreis, I., Loveland, J. E., Arnan, C., Barnes, I., Bennett, R., Berry, A., Bignell, A., Cerdán-Vélez, D., Cochran, K., Cortés, L. T., Davidson, C., Donaldson, S., Dursun, C., Fatima, R., Hardy, M., Hebbar, P., Hollis, Z., James, B. T., Jiang, Y., Johnson, R., Kaur, G., Kay, M., Mangan, R. J., Maquedano, M., Gómez, L. M., Mathlouthi, N., Merritt, R., Ni, P., Palumbo, E., Perteghella, T., Pozo, F., Raj, S., Sisu, C., Steed, E., Sumathipala, D., Suner, M., Uszczynska-Ratajczak, B., Wass, E., Yang, Y. T., Zhang, D., Finn, R. D., Gerstein, M., Guigó, R., Hubbard, T. J. P., Kellis, M., Kundaje, A., Paten, B., Tress, M. L., Birney, E., Martin, F. J., & Frankish, A. (2024). GENCODE 2025: reference gene annotation for human and mouse. Nucleic Acids Research. https://doi.org/10.1093/nar/gkae1078

Source records

crossref · retrieved 2026-09-27T03:56:34.916Z