Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000<i>Salmonella</i>Typhi genomes

Carey ME, Dyson ZA, Ingle DJ, Amir A, Aworh MK, Chattaway MA, Chew KL, Crump JA, Feasey NA, Howden BP, Keddy KH, Maes M, Parry CM, Puyvelde SV, Webb HE, Afolayan AO, Anandan S, Andrews JR, Ashton PM, Basnyat B, Bavdekar A, Bogoch II, Clemens JD, da Silva KE, De A, de Ligt J, Diaz Guevara PL, Dolecek C, Dutta S, Watkins LF, Garrett DO, Godbole G, Gordon MA, Greenhill AR, Griffin C, Gupta M, Hendricksen R, Heyderman RS, Hooda Y, Hormazabal JC, Ikhimiukor OO, Iqbal J, Jacob JJ, Jenkins C, Jinka DR, John J, Kang G, Kanteh A, Kapil A, Karkey A, Kariuki S, Kingsley RA, Koshy RM, Lauer AC, Levine MM, Lingegowda RK, Luby SP, Mackenzie GA, Mashe TA, Msefula C, Mutreja A, Nagaraj G, Nagaraj S, Nair S, Naseri TK, Nimarota-Brown S, Njamkepo E, Okeke IN, Perumal SPB, Pollard AJ, Pragasam AK, Qadri F, Qamar FN, Rahman SIA, Rambocus SD, Rasko DA, Ray P, Robins-Browne R, Rongsen-Chandola T, Rutanga JP, Saha SK, Saha S, Saigal K, Sajib MSI, Seidman JC, Shakya J, Shamanna V, Shastri J, Shrestha R, Sia S, Sikorski MJ, Singh A, Smith AM, Tagg KA, Tamrakar D, Tanmoy AM, Thomas M, Thomas MS, Thomsen R, Thomson NR, Tupua S, Vaidya K, Valcanis M, Veeraraghavan B, Weill F, Wright J, Dougan G, Argimón S, Keane JA, Aanensen DM, Baker S, Holt KE, Global Typhoid Genomics Consortium Group Authorship.

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DOI: 10.1101/2022.12.28.22283969
Published: 2022-12-30
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Open access: yes

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Cite this work

BibTeX

@article{allodium:10.1101/2022.12.28.22283969,
  title = {Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000<i>Salmonella</i>Typhi genomes},
  author = {Carey ME and  Dyson ZA and  Ingle DJ and  Amir A and  Aworh MK and  Chattaway MA and  Chew KL and  Crump JA and  Feasey NA and  Howden BP and  Keddy KH and  Maes M and  Parry CM and  Puyvelde SV and  Webb HE and  Afolayan AO and  Anandan S and  Andrews JR and  Ashton PM and  Basnyat B and  Bavdekar A and  Bogoch II and  Clemens JD and  da Silva KE and  De A and  de Ligt J and  Diaz Guevara PL and  Dolecek C and  Dutta S and  Watkins LF and  Garrett DO and  Godbole G and  Gordon MA and  Greenhill AR and  Griffin C and  Gupta M and  Hendricksen R and  Heyderman RS and  Hooda Y and  Hormazabal JC and  Ikhimiukor OO and  Iqbal J and  Jacob JJ and  Jenkins C and  Jinka DR and  John J and  Kang G and  Kanteh A and  Kapil A and  Karkey A and  Kariuki S and  Kingsley RA and  Koshy RM and  Lauer AC and  Levine MM and  Lingegowda RK and  Luby SP and  Mackenzie GA and  Mashe TA and  Msefula C and  Mutreja A and  Nagaraj G and  Nagaraj S and  Nair S and  Naseri TK and  Nimarota-Brown S and  Njamkepo E and  Okeke IN and  Perumal SPB and  Pollard AJ and  Pragasam AK and  Qadri F and  Qamar FN and  Rahman SIA and  Rambocus SD and  Rasko DA and  Ray P and  Robins-Browne R and  Rongsen-Chandola T and  Rutanga JP and  Saha SK and  Saha S and  Saigal K and  Sajib MSI and  Seidman JC and  Shakya J and  Shamanna V and  Shastri J and  Shrestha R and  Sia S and  Sikorski MJ and  Singh A and  Smith AM and  Tagg KA and  Tamrakar D and  Tanmoy AM and  Thomas M and  Thomas MS and  Thomsen R and  Thomson NR and  Tupua S and  Vaidya K and  Valcanis M and  Veeraraghavan B and  Weill F and  Wright J and  Dougan G and  Argimón S and  Keane JA and  Aanensen DM and  Baker S and  Holt KE and  Global Typhoid Genomics Consortium Group Authorship.},
  year = {2022},
  doi = {10.1101/2022.12.28.22283969},
  url = {https://doi.org/10.1101/2022.12.28.22283969}
}

RIS

TY  - JOUR
TI  - Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000<i>Salmonella</i>Typhi genomes
AU  - Carey ME
AU  -  Dyson ZA
AU  -  Ingle DJ
AU  -  Amir A
AU  -  Aworh MK
AU  -  Chattaway MA
AU  -  Chew KL
AU  -  Crump JA
AU  -  Feasey NA
AU  -  Howden BP
AU  -  Keddy KH
AU  -  Maes M
AU  -  Parry CM
AU  -  Puyvelde SV
AU  -  Webb HE
AU  -  Afolayan AO
AU  -  Anandan S
AU  -  Andrews JR
AU  -  Ashton PM
AU  -  Basnyat B
AU  -  Bavdekar A
AU  -  Bogoch II
AU  -  Clemens JD
AU  -  da Silva KE
AU  -  De A
AU  -  de Ligt J
AU  -  Diaz Guevara PL
AU  -  Dolecek C
AU  -  Dutta S
AU  -  Watkins LF
AU  -  Garrett DO
AU  -  Godbole G
AU  -  Gordon MA
AU  -  Greenhill AR
AU  -  Griffin C
AU  -  Gupta M
AU  -  Hendricksen R
AU  -  Heyderman RS
AU  -  Hooda Y
AU  -  Hormazabal JC
AU  -  Ikhimiukor OO
AU  -  Iqbal J
AU  -  Jacob JJ
AU  -  Jenkins C
AU  -  Jinka DR
AU  -  John J
AU  -  Kang G
AU  -  Kanteh A
AU  -  Kapil A
AU  -  Karkey A
AU  -  Kariuki S
AU  -  Kingsley RA
AU  -  Koshy RM
AU  -  Lauer AC
AU  -  Levine MM
AU  -  Lingegowda RK
AU  -  Luby SP
AU  -  Mackenzie GA
AU  -  Mashe TA
AU  -  Msefula C
AU  -  Mutreja A
AU  -  Nagaraj G
AU  -  Nagaraj S
AU  -  Nair S
AU  -  Naseri TK
AU  -  Nimarota-Brown S
AU  -  Njamkepo E
AU  -  Okeke IN
AU  -  Perumal SPB
AU  -  Pollard AJ
AU  -  Pragasam AK
AU  -  Qadri F
AU  -  Qamar FN
AU  -  Rahman SIA
AU  -  Rambocus SD
AU  -  Rasko DA
AU  -  Ray P
AU  -  Robins-Browne R
AU  -  Rongsen-Chandola T
AU  -  Rutanga JP
AU  -  Saha SK
AU  -  Saha S
AU  -  Saigal K
AU  -  Sajib MSI
AU  -  Seidman JC
AU  -  Shakya J
AU  -  Shamanna V
AU  -  Shastri J
AU  -  Shrestha R
AU  -  Sia S
AU  -  Sikorski MJ
AU  -  Singh A
AU  -  Smith AM
AU  -  Tagg KA
AU  -  Tamrakar D
AU  -  Tanmoy AM
AU  -  Thomas M
AU  -  Thomas MS
AU  -  Thomsen R
AU  -  Thomson NR
AU  -  Tupua S
AU  -  Vaidya K
AU  -  Valcanis M
AU  -  Veeraraghavan B
AU  -  Weill F
AU  -  Wright J
AU  -  Dougan G
AU  -  Argimón S
AU  -  Keane JA
AU  -  Aanensen DM
AU  -  Baker S
AU  -  Holt KE
AU  -  Global Typhoid Genomics Consortium Group Authorship.
PY  - 2022
DO  - 10.1101/2022.12.28.22283969
UR  - https://doi.org/10.1101/2022.12.28.22283969
ER  -

APA

ME, C., ZA, D., DJ, I., A, A., MK, A., MA, C., KL, C., JA, C., NA, F., BP, H., KH, K., M, M., CM, P., SV, P., HE, W., AO, A., S, A., JR, A., PM, A., B, B., A, B., II, B., JD, C., KE, D. S., A, D., J, D. L., PL, D. G., C, D., S, D., LF, W., DO, G., G, G., MA, G., AR, G., C, G., M, G., R, H., RS, H., Y, H., JC, H., OO, I., J, I., JJ, J., C, J., DR, J., J, J., G, K., A, K., A, K., A, K., S, K., RA, K., RM, K., AC, L., MM, L., RK, L., SP, L., GA, M., TA, M., C, M., A, M., G, N., S, N., S, N., TK, N., S, N., E, N., IN, O., SPB, P., AJ, P., AK, P., F, Q., FN, Q., SIA, R., SD, R., DA, R., P, R., R, R., T, R., JP, R., SK, S., S, S., K, S., MSI, S., JC, S., J, S., V, S., J, S., R, S., S, S., MJ, S., A, S., AM, S., KA, T., D, T., AM, T., M, T., MS, T., R, T., NR, T., S, T., K, V., M, V., B, V., F, W., J, W., G, D., S, A., JA, K., DM, A., S, B., KE, H., & Authorship., G. T. G. C. G. (2022). Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000<i>Salmonella</i>Typhi genomes. https://doi.org/10.1101/2022.12.28.22283969

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europe-pmc · retrieved 2026-09-27T02:18:53.673Z