EPISeg: Automated segmentation of the spinal cord on echo planar images using open-access multi-center data

Rohan Banerjee, Merve Kaptan, Alexandra Tinnermann, Ali Khatibi, Alice Dabbagh, Christian Büchel, Christian W. Kündig, Christine S.W. Law, Dario Pfyffer, David J. Lythgoe, Dimitra Tsivaka, Dimitri Van De Ville, Falk Eippert, Fauziyya Muhammad, Gary H. Glover, Gergely David, Grace Haynes, Jan Haaker, Jonathan C.W. Brooks, Jürgen Finsterbusch, Katherine T. Martucci, Kimberly J. Hemmerling, Mahdi Mobarak-Abadi, Mark A. Hoggarth, Matthew A. Howard, Molly G. Bright, Nawal Kinany, Olivia S. Kowalczyk, Patrick Freund, Robert L. Barry, Sean Mackey, Shahabeddin Vahdat, Simon Schading, Stephen B. McMahon, Todd Parish, Véronique Marchand-Pauvert, Yufen Chen, Zachary A. Smith, Kenneth A. Weber II, Benjamin De Leener, Julien Cohen-Adad

Open source

DOI: 10.1162/imag.a.98
Published: 2025
Container: Imaging Neuroscience
Publisher: MIT Press
Open access: unknown

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Cite this work

BibTeX

@article{allodium:10.1162/imag.a.98,
  title = {EPISeg: Automated segmentation of the spinal cord on echo planar images using open-access multi-center data},
  author = {Rohan Banerjee and Merve Kaptan and Alexandra Tinnermann and Ali Khatibi and Alice Dabbagh and Christian Büchel and Christian W. Kündig and Christine S.W. Law and Dario Pfyffer and David J. Lythgoe and Dimitra Tsivaka and Dimitri Van De Ville and Falk Eippert and Fauziyya Muhammad and Gary H. Glover and Gergely David and Grace Haynes and Jan Haaker and Jonathan C.W. Brooks and Jürgen Finsterbusch and Katherine T. Martucci and Kimberly J. Hemmerling and Mahdi Mobarak-Abadi and Mark A. Hoggarth and Matthew A. Howard and Molly G. Bright and Nawal Kinany and Olivia S. Kowalczyk and Patrick Freund and Robert L. Barry and Sean Mackey and Shahabeddin Vahdat and Simon Schading and Stephen B. McMahon and Todd Parish and Véronique Marchand-Pauvert and Yufen Chen and Zachary A. Smith and Kenneth A. Weber II and Benjamin De Leener and Julien Cohen-Adad},
  year = {2025},
  journal = {Imaging Neuroscience},
  doi = {10.1162/imag.a.98},
  url = {https://doi.org/10.1162/imag.a.98}
}

RIS

TY  - JOUR
TI  - EPISeg: Automated segmentation of the spinal cord on echo planar images using open-access multi-center data
AU  - Rohan Banerjee
AU  - Merve Kaptan
AU  - Alexandra Tinnermann
AU  - Ali Khatibi
AU  - Alice Dabbagh
AU  - Christian Büchel
AU  - Christian W. Kündig
AU  - Christine S.W. Law
AU  - Dario Pfyffer
AU  - David J. Lythgoe
AU  - Dimitra Tsivaka
AU  - Dimitri Van De Ville
AU  - Falk Eippert
AU  - Fauziyya Muhammad
AU  - Gary H. Glover
AU  - Gergely David
AU  - Grace Haynes
AU  - Jan Haaker
AU  - Jonathan C.W. Brooks
AU  - Jürgen Finsterbusch
AU  - Katherine T. Martucci
AU  - Kimberly J. Hemmerling
AU  - Mahdi Mobarak-Abadi
AU  - Mark A. Hoggarth
AU  - Matthew A. Howard
AU  - Molly G. Bright
AU  - Nawal Kinany
AU  - Olivia S. Kowalczyk
AU  - Patrick Freund
AU  - Robert L. Barry
AU  - Sean Mackey
AU  - Shahabeddin Vahdat
AU  - Simon Schading
AU  - Stephen B. McMahon
AU  - Todd Parish
AU  - Véronique Marchand-Pauvert
AU  - Yufen Chen
AU  - Zachary A. Smith
AU  - Kenneth A. Weber II
AU  - Benjamin De Leener
AU  - Julien Cohen-Adad
PY  - 2025
JO  - Imaging Neuroscience
DO  - 10.1162/imag.a.98
UR  - https://doi.org/10.1162/imag.a.98
ER  -

APA

Banerjee, R., Kaptan, M., Tinnermann, A., Khatibi, A., Dabbagh, A., Büchel, C., Kündig, C. W., Law, C. S., Pfyffer, D., Lythgoe, D. J., Tsivaka, D., Ville, D. V. D., Eippert, F., Muhammad, F., Glover, G. H., David, G., Haynes, G., Haaker, J., Brooks, J. C., Finsterbusch, J., Martucci, K. T., Hemmerling, K. J., Mobarak-Abadi, M., Hoggarth, M. A., Howard, M. A., Bright, M. G., Kinany, N., Kowalczyk, O. S., Freund, P., Barry, R. L., Mackey, S., Vahdat, S., Schading, S., McMahon, S. B., Parish, T., Marchand-Pauvert, V., Chen, Y., Smith, Z. A., II, K. A. W., Leener, B. D., & Cohen-Adad, J. (2025). EPISeg: Automated segmentation of the spinal cord on echo planar images using open-access multi-center data. Imaging Neuroscience. https://doi.org/10.1162/imag.a.98

Source records

crossref · retrieved 2026-09-25T02:47:48.922Z