Assemblathon 2: evaluating <i>de novo</i> methods of genome assembly in three vertebrate species

Keith R Bradnam, Joseph N Fass, Anton Alexandrov, Paul Baranay, Michael Bechner, Inanç Birol, Sébastien Boisvert, Jarrod A Chapman, Guillaume Chapuis, Rayan Chikhi, Hamidreza Chitsaz, Wen-Chi Chou, Jacques Corbeil, Cristian Del Fabbro, T Roderick Docking, Richard Durbin, Dent Earl, Scott Emrich, Pavel Fedotov, Nuno A Fonseca, Ganeshkumar Ganapathy, Richard A Gibbs, Sante Gnerre, Élénie Godzaridis, Steve Goldstein, Matthias Haimel, Giles Hall, David Haussler, Joseph B Hiatt, Isaac Y Ho, Jason Howard, Martin Hunt, Shaun D Jackman, David B Jaffe, Erich D Jarvis, Huaiyang Jiang, Sergey Kazakov, Paul J Kersey, Jacob O Kitzman, James R Knight, Sergey Koren, Tak-Wah Lam, Dominique Lavenier, François Laviolette, Yingrui Li, Zhenyu Li, Binghang Liu, Yue Liu, Ruibang Luo, Iain MacCallum, Matthew D MacManes, Nicolas Maillet, Sergey Melnikov, Delphine Naquin, Zemin Ning, Thomas D Otto, Benedict Paten, Octávio S Paulo, Adam M Phillippy, Francisco Pina-Martins, Michael Place, Dariusz Przybylski, Xiang Qin, Carson Qu, Filipe J Ribeiro, Stephen Richards, Daniel S Rokhsar, J Graham Ruby, Simone Scalabrin, Michael C Schatz, David C Schwartz, Alexey Sergushichev, Ted Sharpe, Timothy I Shaw, Jay Shendure, Yujian Shi, Jared T Simpson, Henry Song, Fedor Tsarev, Francesco Vezzi, Riccardo Vicedomini, Bruno M Vieira, Jun Wang, Kim C Worley, Shuangye Yin, Siu-Ming Yiu, Jianying Yuan, Guojie Zhang, Hao Zhang, Shiguo Zhou, Ian F Korf

Open source

DOI
10.1186/2047-217x-2-10
Published
2013-07-22
Container
Gigascience
Publisher
Oxford University Press (OUP)
Open access
unknown

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BibTeX

@article{allodium:10.1186/2047-217x-2-10,
  title = {Assemblathon 2: evaluating
                    <i>de novo</i>
                    methods of genome assembly in three vertebrate species},
  author = {Keith R Bradnam and Joseph N Fass and Anton Alexandrov and Paul Baranay and Michael Bechner and Inanç Birol and Sébastien Boisvert and Jarrod A Chapman and Guillaume Chapuis and Rayan Chikhi and Hamidreza Chitsaz and Wen-Chi Chou and Jacques Corbeil and Cristian Del Fabbro and T Roderick Docking and Richard Durbin and Dent Earl and Scott Emrich and Pavel Fedotov and Nuno A Fonseca and Ganeshkumar Ganapathy and Richard A Gibbs and Sante Gnerre and Élénie Godzaridis and Steve Goldstein and Matthias Haimel and Giles Hall and David Haussler and Joseph B Hiatt and Isaac Y Ho and Jason Howard and Martin Hunt and Shaun D Jackman and David B Jaffe and Erich D Jarvis and Huaiyang Jiang and Sergey Kazakov and Paul J Kersey and Jacob O Kitzman and James R Knight and Sergey Koren and Tak-Wah Lam and Dominique Lavenier and François Laviolette and Yingrui Li and Zhenyu Li and Binghang Liu and Yue Liu and Ruibang Luo and Iain MacCallum and Matthew D MacManes and Nicolas Maillet and Sergey Melnikov and Delphine Naquin and Zemin Ning and Thomas D Otto and Benedict Paten and Octávio S Paulo and Adam M Phillippy and Francisco Pina-Martins and Michael Place and Dariusz Przybylski and Xiang Qin and Carson Qu and Filipe J Ribeiro and Stephen Richards and Daniel S Rokhsar and J Graham Ruby and Simone Scalabrin and Michael C Schatz and David C Schwartz and Alexey Sergushichev and Ted Sharpe and Timothy I Shaw and Jay Shendure and Yujian Shi and Jared T Simpson and Henry Song and Fedor Tsarev and Francesco Vezzi and Riccardo Vicedomini and Bruno M Vieira and Jun Wang and Kim C Worley and Shuangye Yin and Siu-Ming Yiu and Jianying Yuan and Guojie Zhang and Hao Zhang and Shiguo Zhou and Ian F Korf},
  year = {2013},
  journal = {Gigascience},
  doi = {10.1186/2047-217x-2-10},
  url = {https://doi.org/10.1186/2047-217x-2-10}
}

RIS

TY  - JOUR
TI  - Assemblathon 2: evaluating
                    <i>de novo</i>
                    methods of genome assembly in three vertebrate species
AU  - Keith R Bradnam
AU  - Joseph N Fass
AU  - Anton Alexandrov
AU  - Paul Baranay
AU  - Michael Bechner
AU  - Inanç Birol
AU  - Sébastien Boisvert
AU  - Jarrod A Chapman
AU  - Guillaume Chapuis
AU  - Rayan Chikhi
AU  - Hamidreza Chitsaz
AU  - Wen-Chi Chou
AU  - Jacques Corbeil
AU  - Cristian Del Fabbro
AU  - T Roderick Docking
AU  - Richard Durbin
AU  - Dent Earl
AU  - Scott Emrich
AU  - Pavel Fedotov
AU  - Nuno A Fonseca
AU  - Ganeshkumar Ganapathy
AU  - Richard A Gibbs
AU  - Sante Gnerre
AU  - Élénie Godzaridis
AU  - Steve Goldstein
AU  - Matthias Haimel
AU  - Giles Hall
AU  - David Haussler
AU  - Joseph B Hiatt
AU  - Isaac Y Ho
AU  - Jason Howard
AU  - Martin Hunt
AU  - Shaun D Jackman
AU  - David B Jaffe
AU  - Erich D Jarvis
AU  - Huaiyang Jiang
AU  - Sergey Kazakov
AU  - Paul J Kersey
AU  - Jacob O Kitzman
AU  - James R Knight
AU  - Sergey Koren
AU  - Tak-Wah Lam
AU  - Dominique Lavenier
AU  - François Laviolette
AU  - Yingrui Li
AU  - Zhenyu Li
AU  - Binghang Liu
AU  - Yue Liu
AU  - Ruibang Luo
AU  - Iain MacCallum
AU  - Matthew D MacManes
AU  - Nicolas Maillet
AU  - Sergey Melnikov
AU  - Delphine Naquin
AU  - Zemin Ning
AU  - Thomas D Otto
AU  - Benedict Paten
AU  - Octávio S Paulo
AU  - Adam M Phillippy
AU  - Francisco Pina-Martins
AU  - Michael Place
AU  - Dariusz Przybylski
AU  - Xiang Qin
AU  - Carson Qu
AU  - Filipe J Ribeiro
AU  - Stephen Richards
AU  - Daniel S Rokhsar
AU  - J Graham Ruby
AU  - Simone Scalabrin
AU  - Michael C Schatz
AU  - David C Schwartz
AU  - Alexey Sergushichev
AU  - Ted Sharpe
AU  - Timothy I Shaw
AU  - Jay Shendure
AU  - Yujian Shi
AU  - Jared T Simpson
AU  - Henry Song
AU  - Fedor Tsarev
AU  - Francesco Vezzi
AU  - Riccardo Vicedomini
AU  - Bruno M Vieira
AU  - Jun Wang
AU  - Kim C Worley
AU  - Shuangye Yin
AU  - Siu-Ming Yiu
AU  - Jianying Yuan
AU  - Guojie Zhang
AU  - Hao Zhang
AU  - Shiguo Zhou
AU  - Ian F Korf
PY  - 2013
JO  - Gigascience
DO  - 10.1186/2047-217x-2-10
UR  - https://doi.org/10.1186/2047-217x-2-10
ER  - 

APA

Bradnam, K. R., Fass, J. N., Alexandrov, A., Baranay, P., Bechner, M., Birol, I., Boisvert, S., Chapman, J. A., Chapuis, G., Chikhi, R., Chitsaz, H., Chou, W., Corbeil, J., Fabbro, C. D., Docking, T. R., Durbin, R., Earl, D., Emrich, S., Fedotov, P., Fonseca, N. A., Ganapathy, G., Gibbs, R. A., Gnerre, S., Godzaridis, É., Goldstein, S., Haimel, M., Hall, G., Haussler, D., Hiatt, J. B., Ho, I. Y., Howard, J., Hunt, M., Jackman, S. D., Jaffe, D. B., Jarvis, E. D., Jiang, H., Kazakov, S., Kersey, P. J., Kitzman, J. O., Knight, J. R., Koren, S., Lam, T., Lavenier, D., Laviolette, F., Li, Y., Li, Z., Liu, B., Liu, Y., Luo, R., MacCallum, I., MacManes, M. D., Maillet, N., Melnikov, S., Naquin, D., Ning, Z., Otto, T. D., Paten, B., Paulo, O. S., Phillippy, A. M., Pina-Martins, F., Place, M., Przybylski, D., Qin, X., Qu, C., Ribeiro, F. J., Richards, S., Rokhsar, D. S., Ruby, J. G., Scalabrin, S., Schatz, M. C., Schwartz, D. C., Sergushichev, A., Sharpe, T., Shaw, T. I., Shendure, J., Shi, Y., Simpson, J. T., Song, H., Tsarev, F., Vezzi, F., Vicedomini, R., Vieira, B. M., Wang, J., Worley, K. C., Yin, S., Yiu, S., Yuan, J., Zhang, G., Zhang, H., Zhou, S., & Korf, I. F. (2013). Assemblathon 2: evaluating <i>de novo</i> methods of genome assembly in three vertebrate species. Gigascience. https://doi.org/10.1186/2047-217x-2-10

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