Computing double-pushout graph transformation rules and atom-to-atom maps from KEGG RCLASS data.

Beier N, Gatter T, Andersen JL, Stadler PF

Open source

DOI: 10.1186/s13015-025-00294-6
Published: 2026 Jan 29
Container: Algorithms for molecular biology : AMB
Publisher: Not recorded
Open access: yes

Credibility signals

uncertain Score 53/100 under policy 1.0.0. This is a metadata assessment, not a judgment of the paper's conclusions.

Show all credibility signals

cautionDOI registered: No matching Crossref record was present in this response. Source: Crossref; license: CC0 metadata
cautionDOI resolves: No matching Crossref record was present in this response. Source: Crossref; license: CC0 metadata
supportingDirectory of Open Access Journals: A matching record was returned by DOAJ. Source: DOAJ; license: CC0
not scoredMEDLINE indexed: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredOpenAlex core source: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredKnown publisher allow-list: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredROR affiliation: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredRetraction Watch retraction: No retraction notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredRetraction Watch expression of concern: No expression of concern notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredRetraction Watch correction: No correction notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredRetraction Watch reinstatement: No reinstatement notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
supportingOpen access status: Normalized open-access status: open. Source: Normalized work metadata; license: Caller-provided; provenance license not supplied to scorer
not scoredPublication license: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredPublication version: A publication version was supplied but is not scored. Source: Normalized work metadata; license: Caller-provided; provenance license not supplied to scorer
cautionMetadata completeness: 5 of 6 scored descriptive metadata groups are present; missing fields increase uncertainty. Source: Normalized work metadata; license: Caller-provided; provenance license not supplied to scorer

Cite this work

BibTeX

@article{allodium:10.1186/s13015-025-00294-6,
  title = {Computing double-pushout graph transformation rules and atom-to-atom maps from KEGG RCLASS data.},
  author = {Beier N and Gatter T and Andersen JL and Stadler PF},
  year = {2026},
  journal = {Algorithms for molecular biology : AMB},
  doi = {10.1186/s13015-025-00294-6},
  url = {https://doi.org/10.1186/s13015-025-00294-6}
}

RIS

TY  - JOUR
TI  - Computing double-pushout graph transformation rules and atom-to-atom maps from KEGG RCLASS data.
AU  - Beier N
AU  - Gatter T
AU  - Andersen JL
AU  - Stadler PF
PY  - 2026
JO  - Algorithms for molecular biology : AMB
DO  - 10.1186/s13015-025-00294-6
UR  - https://doi.org/10.1186/s13015-025-00294-6
ER  -

APA

N, B., T, G., JL, A., & PF, S. (2026). Computing double-pushout graph transformation rules and atom-to-atom maps from KEGG RCLASS data.. Algorithms for molecular biology : AMB. https://doi.org/10.1186/s13015-025-00294-6

Source records

pubmed · retrieved 2026-11-10T13:57:20.875Z
europe-pmc · retrieved 2026-11-10T13:57:20.879Z
doaj · retrieved 2026-11-10T13:57:21.106Z