CellMemory: hierarchical interpretation of out-of-distribution cells using bottlenecked transformer

Qifei Wang, He Zhu, Yiwen Hu, Yanjie Chen, Yuwei Wang, Guochao Li, Yun Li, Jinfeng Chen, Xuegong Zhang, James Zou, Manolis Kellis, Yue Li, Dianbo Liu, Lan Jiang

Open source

DOI
10.1186/s13059-025-03638-y
Published
2025-06-23
Container
Genome Biology
Publisher
Springer Science and Business Media LLC
Open access
unknown

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BibTeX

@article{allodium:10.1186/s13059-025-03638-y,
  title = {CellMemory: hierarchical interpretation of out-of-distribution cells using bottlenecked transformer},
  author = {Qifei Wang and He Zhu and Yiwen Hu and Yanjie Chen and Yuwei Wang and Guochao Li and Yun Li and Jinfeng Chen and Xuegong Zhang and James Zou and Manolis Kellis and Yue Li and Dianbo Liu and Lan Jiang},
  year = {2025},
  journal = {Genome Biology},
  doi = {10.1186/s13059-025-03638-y},
  url = {https://doi.org/10.1186/s13059-025-03638-y}
}

RIS

TY  - JOUR
TI  - CellMemory: hierarchical interpretation of out-of-distribution cells using bottlenecked transformer
AU  - Qifei Wang
AU  - He Zhu
AU  - Yiwen Hu
AU  - Yanjie Chen
AU  - Yuwei Wang
AU  - Guochao Li
AU  - Yun Li
AU  - Jinfeng Chen
AU  - Xuegong Zhang
AU  - James Zou
AU  - Manolis Kellis
AU  - Yue Li
AU  - Dianbo Liu
AU  - Lan Jiang
PY  - 2025
JO  - Genome Biology
DO  - 10.1186/s13059-025-03638-y
UR  - https://doi.org/10.1186/s13059-025-03638-y
ER  - 

APA

Wang, Q., Zhu, H., Hu, Y., Chen, Y., Wang, Y., Li, G., Li, Y., Chen, J., Zhang, X., Zou, J., Kellis, M., Li, Y., Liu, D., & Jiang, L. (2025). CellMemory: hierarchical interpretation of out-of-distribution cells using bottlenecked transformer. Genome Biology. https://doi.org/10.1186/s13059-025-03638-y

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