SpaNiche: spatial niche analysis to explore colocalization patterns and cellular interactions in spatial transcriptomics data.

Huang S, Ran Q, Tang J, Wang X, Xi J, Ma S, Xi R

DOI: 10.1186/s13059-026-04069-z
Published: 2026 Apr 21
Container: Genome biology
Publisher: Not recorded
Open access: yes

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Cite this work

BibTeX

@article{allodium:10.1186/s13059-026-04069-z,
  title = {SpaNiche: spatial niche analysis to explore colocalization patterns and cellular interactions in spatial transcriptomics data.},
  author = {Huang S and Ran Q and Tang J and Wang X and Xi J and Ma S and Xi R},
  year = {2026},
  journal = {Genome biology},
  doi = {10.1186/s13059-026-04069-z},
  url = {https://doi.org/10.1186/s13059-026-04069-z}
}

RIS

TY  - JOUR
TI  - SpaNiche: spatial niche analysis to explore colocalization patterns and cellular interactions in spatial transcriptomics data.
AU  - Huang S
AU  - Ran Q
AU  - Tang J
AU  - Wang X
AU  - Xi J
AU  - Ma S
AU  - Xi R
PY  - 2026
JO  - Genome biology
DO  - 10.1186/s13059-026-04069-z
UR  - https://doi.org/10.1186/s13059-026-04069-z
ER  -

APA

S, H., Q, R., J, T., X, W., J, X., S, M., & R, X. (2026). SpaNiche: spatial niche analysis to explore colocalization patterns and cellular interactions in spatial transcriptomics data.. Genome biology. https://doi.org/10.1186/s13059-026-04069-z

Source records

pubmed · retrieved 2026-09-26T11:25:27.837Z