Gromacs MetaDump: a tool for extracting GROMACS simulation metadata

Adrián Rošinec, Terézia Slanináková, Tomáš Pavlík, Róbert Randiak, Tomáš Svoboda, Tomáš Raček, Gabriela Bučeková, Ondřej Schindler, Matej Antol, Aleš Křenek, Karel Berka, Radka Svobodová

Open source

DOI: 10.1186/s13321-025-01082-5
Published: 2025-10-23
Container: Journal of Cheminformatics
Publisher: Springer Science and Business Media LLC
Open access: unknown

Credibility signals

uncertain Score 64/100 under policy 1.0.0. This is a metadata assessment, not a judgment of the paper's conclusions.

Show all credibility signals

supportingDOI registered: A matching record was returned by Crossref. Source: Crossref; license: CC0 metadata
supportingDOI resolves: A matching record was returned by Crossref. Source: Crossref; license: CC0 metadata
not scoredDirectory of Open Access Journals: No matching DOAJ record was present in this response. No allow-list match; this is not evidence of low credibility. Source: DOAJ; license: CC0
not scoredMEDLINE indexed: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredOpenAlex core source: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredKnown publisher allow-list: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredROR affiliation: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredRetraction Watch retraction: No retraction notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredRetraction Watch expression of concern: No expression of concern notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredRetraction Watch correction: No correction notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredRetraction Watch reinstatement: No reinstatement notice matched this DOI in the deployed snapshot. No matching event found; coverage may be incomplete. Source: Retraction Watch; license: CC BY 4.0
not scoredOpen access status: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredPublication license: Not checked or no result supplied; no credibility inference made. Source: No authority result supplied; license: Unknown
not scoredPublication version: A publication version was supplied but is not scored. Source: Normalized work metadata; license: Caller-provided; provenance license not supplied to scorer
supportingMetadata completeness: All 6 scored descriptive metadata groups are present. Source: Normalized work metadata; license: Caller-provided; provenance license not supplied to scorer

Cite this work

BibTeX

@article{allodium:10.1186/s13321-025-01082-5,
  title = {Gromacs MetaDump: a tool for extracting GROMACS simulation metadata},
  author = {Adrián Rošinec and Terézia Slanináková and Tomáš Pavlík and Róbert Randiak and Tomáš Svoboda and Tomáš Raček and Gabriela Bučeková and Ondřej Schindler and Matej Antol and Aleš Křenek and Karel Berka and Radka Svobodová},
  year = {2025},
  journal = {Journal of Cheminformatics},
  doi = {10.1186/s13321-025-01082-5},
  url = {https://doi.org/10.1186/s13321-025-01082-5}
}

RIS

TY  - JOUR
TI  - Gromacs MetaDump: a tool for extracting GROMACS simulation metadata
AU  - Adrián Rošinec
AU  - Terézia Slanináková
AU  - Tomáš Pavlík
AU  - Róbert Randiak
AU  - Tomáš Svoboda
AU  - Tomáš Raček
AU  - Gabriela Bučeková
AU  - Ondřej Schindler
AU  - Matej Antol
AU  - Aleš Křenek
AU  - Karel Berka
AU  - Radka Svobodová
PY  - 2025
JO  - Journal of Cheminformatics
DO  - 10.1186/s13321-025-01082-5
UR  - https://doi.org/10.1186/s13321-025-01082-5
ER  -

APA

Rošinec, A., Slanináková, T., Pavlík, T., Randiak, R., Svoboda, T., Raček, T., Bučeková, G., Schindler, O., Antol, M., Křenek, A., Berka, K., & Svobodová, R. (2025). Gromacs MetaDump: a tool for extracting GROMACS simulation metadata. Journal of Cheminformatics. https://doi.org/10.1186/s13321-025-01082-5

Source records

crossref · retrieved 2026-09-26T12:57:33.103Z