BacT-Seq, a Nanopore-Based Whole-Genome Sequencing Workflow Prototype for Rapid and Accurate Pathogen Identification and Resistance Prediction from Positive Blood Cultures: A Feasibility Study.

Azami ME, Lanet V, Beaulieu C, Griffon A, Schicklin S, Mahé P, Darnaud M, Helsmoortel M, Sentausa E, Saliou A, Poncelet M, Fleury R, Ibranosyan M, Vandenesch F, Santiago-Allexant E.

Open source

DOI: 10.3390/diagnostics16010133
Published: 2026-01-01
Container: Diagnostics (Basel)
Publisher: Not recorded
Open access: yes

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Cite this work

BibTeX

@article{allodium:10.3390/diagnostics16010133,
  title = {BacT-Seq, a Nanopore-Based Whole-Genome Sequencing Workflow Prototype for Rapid and Accurate Pathogen Identification and Resistance Prediction from Positive Blood Cultures: A Feasibility Study.},
  author = {Azami ME and  Lanet V and  Beaulieu C and  Griffon A and  Schicklin S and  Mahé P and  Darnaud M and  Helsmoortel M and  Sentausa E and  Saliou A and  Poncelet M and  Fleury R and  Ibranosyan M and  Vandenesch F and  Santiago-Allexant E.},
  year = {2026},
  journal = {Diagnostics (Basel)},
  doi = {10.3390/diagnostics16010133},
  url = {https://doi.org/10.3390/diagnostics16010133}
}

RIS

TY  - JOUR
TI  - BacT-Seq, a Nanopore-Based Whole-Genome Sequencing Workflow Prototype for Rapid and Accurate Pathogen Identification and Resistance Prediction from Positive Blood Cultures: A Feasibility Study.
AU  - Azami ME
AU  -  Lanet V
AU  -  Beaulieu C
AU  -  Griffon A
AU  -  Schicklin S
AU  -  Mahé P
AU  -  Darnaud M
AU  -  Helsmoortel M
AU  -  Sentausa E
AU  -  Saliou A
AU  -  Poncelet M
AU  -  Fleury R
AU  -  Ibranosyan M
AU  -  Vandenesch F
AU  -  Santiago-Allexant E.
PY  - 2026
JO  - Diagnostics (Basel)
DO  - 10.3390/diagnostics16010133
UR  - https://doi.org/10.3390/diagnostics16010133
ER  -

APA

ME, A., V, L., C, B., A, G., S, S., P, M., M, D., M, H., E, S., A, S., M, P., R, F., M, I., F, V., & E., S. (2026). BacT-Seq, a Nanopore-Based Whole-Genome Sequencing Workflow Prototype for Rapid and Accurate Pathogen Identification and Resistance Prediction from Positive Blood Cultures: A Feasibility Study.. Diagnostics (Basel). https://doi.org/10.3390/diagnostics16010133

Source records

europe-pmc · retrieved 2026-09-24T23:38:28.070Z
doaj · retrieved 2026-09-24T23:38:28.078Z