The Human Gut Cell Atlas v1.0: A Unified, Community-Built Reference of Cellular Diversity Across the Gut

Kyle Kimler, Christopher Lance, Balazs Bohar, Abdalla Ahmed, Ran Zhou, Raquel Bartolome-Casado, Victoria Gudino, Ricardo O. Ramirez Flores, Fredrik V. Junghus, Urs M. Morbe, Diana Domanska, Michaela F. Mueller, Madelyn R. Moy, Angela Sanzo-Machuca, Marton Olbei, Batuhan Cakir, Benjamin Weinert, Benjamin M. Frey, Michael Glinka, Tobi Alegbe, Duy Pham, Joshua de Sousa Casal, Alexander V. Predeus, Alexandre Denadai-Souza, Francesca Perrone, Hyun Chang Lee, Sushma Chowdary Maddipatla, David Rogers, Mary K. Futey, Arsenios Chatzigeorgiou, Ida Zucchi, Jasmine Belfiore, Lucia Robson, Agne Antanaviciute, Daniel B. Rainbow, Tatiana A. Karakasheva, Richard Baldock, Derek Houghton, Vladimir A. Shitov, Chenchen Zhu, Chloe Hyun-Jung Lee, Elva Maria Novoa-del-Toro, Sara Kimler, Anna Hupalowska, Guy E. Boeckxstaens, Eugene C. Butcher, Lori A. Coburn, Shahida Din, Jellert T. Gaublomme, Narayanan Kasthuri, Bartha M. Knoppers, Dermot P. B. McGovern, Jeffrey R. Moffitt, Andreas E. Moor, Peng Qiu, Keith T. Wilson, Unknown, Candace M. Cham, Eugene B. Chang, Can Ergen, Donna L. Farber, Mennatallah Ghouraba, Jason Koval, Christopher J. Lengner, Michal Mark, David T. Rubin, Peter A. Sims, Steven B. Wells, Bingqing Xie, Nir Yosef, Yusen Zhou, David Fawkner-Corbett, Thomas M. Fenton, Scott T. Magness, Shalev Itzkovitz, Monika Krzak, Rebecca E McIntyre, Adrienne Luoma, Gregory J. Wickham, Joseph Burclaff, Shengbao Suo, Liza Konnikova, Keith Alexander Breau, Weihong Gu, Espen S Baekkevold, Unknown, D Leland Taylor, Joanne L. Jones, John W. Hickey, Carl A Anderson, Tim Raine, Julio Saez-Rodriguez, Sebastian Pott, Irene Papatheodorou, David J Adams, Alison Simmons, Albert Burger, Tamas Korcsmaros, Mark J Arends, Anindita Basu, Kathryn E. Hamilton, William W. Agace, David Osumi-Sutherland, Kylie R. James, Amanda J. Oliver, Rasa Elmentaite, Michael P. Snyder, Sarah A. Teichmann, John Randell, Azucena Salas, Fabian J. Theis, Malte D. Luecken, Daniel Kotlarz, Matthias Zilbauer, Jose Ordovas-Montanes

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DOI: 10.64898/2026.10.09.753994
Published: 2026-10-12
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BibTeX

@article{allodium:10.64898/2026.10.09.753994,
title = {The Human Gut Cell Atlas v1.0: A Unified, Community-Built Reference of Cellular Diversity Across the Gut},
author = {Kyle Kimler and Christopher Lance and Balazs Bohar and Abdalla Ahmed and Ran Zhou and Raquel Bartolome-Casado and Victoria Gudino and Ricardo O. Ramirez Flores and Fredrik V. Junghus and Urs M. Morbe and Diana Domanska and Michaela F. Mueller and Madelyn R. Moy and Angela Sanzo-Machuca and Marton Olbei and Batuhan Cakir and Benjamin Weinert and Benjamin M. Frey and Michael Glinka and Tobi Alegbe and Duy Pham and Joshua de Sousa Casal and Alexander V. Predeus and Alexandre Denadai-Souza and Francesca Perrone and Hyun Chang Lee and Sushma Chowdary Maddipatla and David Rogers and Mary K. Futey and Arsenios Chatzigeorgiou and Ida Zucchi and Jasmine Belfiore and Lucia Robson and Agne Antanaviciute and Daniel B. Rainbow and Tatiana A. Karakasheva and Richard Baldock and Derek Houghton and Vladimir A. Shitov and Chenchen Zhu and Chloe Hyun-Jung Lee and Elva Maria Novoa-del-Toro and Sara Kimler and Anna Hupalowska and Guy E. Boeckxstaens and Eugene C. Butcher and Lori A. Coburn and Shahida Din and Jellert T. Gaublomme and Narayanan Kasthuri and Bartha M. Knoppers and Dermot P. B. McGovern and Jeffrey R. Moffitt and Andreas E. Moor and Peng Qiu and Keith T. Wilson and Unknown and Candace M. Cham and Eugene B. Chang and Can Ergen and Donna L. Farber and Mennatallah Ghouraba and Jason Koval and Christopher J. Lengner and Michal Mark and David T. Rubin and Peter A. Sims and Steven B. Wells and Bingqing Xie and Nir Yosef and Yusen Zhou and David Fawkner-Corbett and Thomas M. Fenton and Scott T. Magness and Shalev Itzkovitz and Monika Krzak and Rebecca E McIntyre and Adrienne Luoma and Gregory J. Wickham and Joseph Burclaff and Shengbao Suo and Liza Konnikova and Keith Alexander Breau and Weihong Gu and Espen S Baekkevold and Unknown and D Leland Taylor and Joanne L. Jones and John W. Hickey and Carl A Anderson and Tim Raine and Julio Saez-Rodriguez and Sebastian Pott and Irene Papatheodorou and David J Adams and Alison Simmons and Albert Burger and Tamas Korcsmaros and Mark J Arends and Anindita Basu and Kathryn E. Hamilton and William W. Agace and David Osumi-Sutherland and Kylie R. James and Amanda J. Oliver and Rasa Elmentaite and Michael P. Snyder and Sarah A. Teichmann and John Randell and Azucena Salas and Fabian J. Theis and Malte D. Luecken and Daniel Kotlarz and Matthias Zilbauer and Jose Ordovas-Montanes},
year = {2026},
doi = {10.64898/2026.10.09.753994},
url = {https://doi.org/10.64898/2026.10.09.753994}
}

RIS

TY  - JOUR
TI  - The Human Gut Cell Atlas v1.0: A Unified, Community-Built Reference of Cellular Diversity Across the Gut
AU  - Kyle Kimler
AU  - Christopher Lance
AU  - Balazs Bohar
AU  - Abdalla Ahmed
AU  - Ran Zhou
AU  - Raquel Bartolome-Casado
AU  - Victoria Gudino
AU  - Ricardo O. Ramirez Flores
AU  - Fredrik V. Junghus
AU  - Urs M. Morbe
AU  - Diana Domanska
AU  - Michaela F. Mueller
AU  - Madelyn R. Moy
AU  - Angela Sanzo-Machuca
AU  - Marton Olbei
AU  - Batuhan Cakir
AU  - Benjamin Weinert
AU  - Benjamin M. Frey
AU  - Michael Glinka
AU  - Tobi Alegbe
AU  - Duy Pham
AU  - Joshua de Sousa Casal
AU  - Alexander V. Predeus
AU  - Alexandre Denadai-Souza
AU  - Francesca Perrone
AU  - Hyun Chang Lee
AU  - Sushma Chowdary Maddipatla
AU  - David Rogers
AU  - Mary K. Futey
AU  - Arsenios Chatzigeorgiou
AU  - Ida Zucchi
AU  - Jasmine Belfiore
AU  - Lucia Robson
AU  - Agne Antanaviciute
AU  - Daniel B. Rainbow
AU  - Tatiana A. Karakasheva
AU  - Richard Baldock
AU  - Derek Houghton
AU  - Vladimir A. Shitov
AU  - Chenchen Zhu
AU  - Chloe Hyun-Jung Lee
AU  - Elva Maria Novoa-del-Toro
AU  - Sara Kimler
AU  - Anna Hupalowska
AU  - Guy E. Boeckxstaens
AU  - Eugene C. Butcher
AU  - Lori A. Coburn
AU  - Shahida Din
AU  - Jellert T. Gaublomme
AU  - Narayanan Kasthuri
AU  - Bartha M. Knoppers
AU  - Dermot P. B. McGovern
AU  - Jeffrey R. Moffitt
AU  - Andreas E. Moor
AU  - Peng Qiu
AU  - Keith T. Wilson
AU  - Unknown
AU  - Candace M. Cham
AU  - Eugene B. Chang
AU  - Can Ergen
AU  - Donna L. Farber
AU  - Mennatallah Ghouraba
AU  - Jason Koval
AU  - Christopher J. Lengner
AU  - Michal Mark
AU  - David T. Rubin
AU  - Peter A. Sims
AU  - Steven B. Wells
AU  - Bingqing Xie
AU  - Nir Yosef
AU  - Yusen Zhou
AU  - David Fawkner-Corbett
AU  - Thomas M. Fenton
AU  - Scott T. Magness
AU  - Shalev Itzkovitz
AU  - Monika Krzak
AU  - Rebecca E McIntyre
AU  - Adrienne Luoma
AU  - Gregory J. Wickham
AU  - Joseph Burclaff
AU  - Shengbao Suo
AU  - Liza Konnikova
AU  - Keith Alexander Breau
AU  - Weihong Gu
AU  - Espen S Baekkevold
AU  - Unknown
AU  - D Leland Taylor
AU  - Joanne L. Jones
AU  - John W. Hickey
AU  - Carl A Anderson
AU  - Tim Raine
AU  - Julio Saez-Rodriguez
AU  - Sebastian Pott
AU  - Irene Papatheodorou
AU  - David J Adams
AU  - Alison Simmons
AU  - Albert Burger
AU  - Tamas Korcsmaros
AU  - Mark J Arends
AU  - Anindita Basu
AU  - Kathryn E. Hamilton
AU  - William W. Agace
AU  - David Osumi-Sutherland
AU  - Kylie R. James
AU  - Amanda J. Oliver
AU  - Rasa Elmentaite
AU  - Michael P. Snyder
AU  - Sarah A. Teichmann
AU  - John Randell
AU  - Azucena Salas
AU  - Fabian J. Theis
AU  - Malte D. Luecken
AU  - Daniel Kotlarz
AU  - Matthias Zilbauer
AU  - Jose Ordovas-Montanes
PY  - 2026
DO  - 10.64898/2026.10.09.753994
UR  - https://doi.org/10.64898/2026.10.09.753994
ER  -

APA

Kimler, K., Lance, C., Bohar, B., Ahmed, A., Zhou, R., Bartolome-Casado, R., Gudino, V., Flores, R. O. R., Junghus, F. V., Morbe, U. M., Domanska, D., Mueller, M. F., Moy, M. R., Sanzo-Machuca, A., Olbei, M., Cakir, B., Weinert, B., Frey, B. M., Glinka, M., Alegbe, T., Pham, D., Casal, J. D. S., Predeus, A. V., Denadai-Souza, A., Perrone, F., Lee, H. C., Maddipatla, S. C., Rogers, D., Futey, M. K., Chatzigeorgiou, A., Zucchi, I., Belfiore, J., Robson, L., Antanaviciute, A., Rainbow, D. B., Karakasheva, T. A., Baldock, R., Houghton, D., Shitov, V. A., Zhu, C., Lee, C. H., Novoa-del-Toro, E. M., Kimler, S., Hupalowska, A., Boeckxstaens, G. E., Butcher, E. C., Coburn, L. A., Din, S., Gaublomme, J. T., Kasthuri, N., Knoppers, B. M., McGovern, D. P. B., Moffitt, J. R., Moor, A. E., Qiu, P., Wilson, K. T., Unknown, Cham, C. M., Chang, E. B., Ergen, C., Farber, D. L., Ghouraba, M., Koval, J., Lengner, C. J., Mark, M., Rubin, D. T., Sims, P. A., Wells, S. B., Xie, B., Yosef, N., Zhou, Y., Fawkner-Corbett, D., Fenton, T. M., Magness, S. T., Itzkovitz, S., Krzak, M., McIntyre, R. E., Luoma, A., Wickham, G. J., Burclaff, J., Suo, S., Konnikova, L., Breau, K. A., Gu, W., Baekkevold, E. S., Unknown, Taylor, D. L., Jones, J. L., Hickey, J. W., Anderson, C. A., Raine, T., Saez-Rodriguez, J., Pott, S., Papatheodorou, I., Adams, D. J., Simmons, A., Burger, A., Korcsmaros, T., Arends, M. J., Basu, A., Hamilton, K. E., Agace, W. W., Osumi-Sutherland, D., James, K. R., Oliver, A. J., Elmentaite, R., Snyder, M. P., Teichmann, S. A., Randell, J., Salas, A., Theis, F. J., Luecken, M. D., Kotlarz, D., Zilbauer, M., & Ordovas-Montanes, J. (2026). The Human Gut Cell Atlas v1.0: A Unified, Community-Built Reference of Cellular Diversity Across the Gut. https://doi.org/10.64898/2026.10.09.753994

Source records

crossref · retrieved 2026-11-09T18:50:07.962Z